CDS

Accession Number TCMCG022C21581
gbkey CDS
Protein Id XP_010068998.2
Location join(5154098..5154166,5154605..5154727,5155956..5156113,5156938..5156982,5160133..5160211,5160297..5160370,5160630..5160736,5161923..5162105,5162612..5162815,5162900..5163116,5163204..5163278,5163376..5163713,5163874..5164066,5164187..5164433,5164513..5164852,5165084..5165264,5165373..5165513,5165622..5165883,5166044..5166466,5167333..5167796,5169161..5169297,5169378..5169559,5169650..5170042,5170359..5170484,5170752..5170817,5170898..5172717,5172795..5173074,5173666..5173899,5175034..5175555,5176093..5176225,5176814..5177070)
Gene LOC104456008
GeneID 104456008
Organism Eucalyptus grandis

Protein

Length 2690aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA698663
db_source XM_010070696.3
Definition small subunit processome component 20 homolog [Eucalyptus grandis]

EGGNOG-MAPPER Annotation

COG_category V
Description Small subunit processome component 20 homolog
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
KEGG_ko ko:K14772        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs -

Sequence

CDS:  
ATGGCGACTCCGTCCGACGCTCAGGCCGTCAAGTCTCTCAACACGGCGCCCGGCCGCCGGCGCTTCGTCTTCAAAACGTTTTCCCAGAGGTTGGAGGAAATTGAGATCGATGTCTACAAGAGCCTCGACAGAATTAAGTCCGAGCCTTCTGAGGGATCGTCTTTTTTCAGGGATTGCCTCGTAGAATGGAGGGAATTAAACACCACGGAGGATTTTATCTCTTATTACGAGGAGATTATGCCTTTAGTACAGACATTGCCCTTGGTTTTATTGCACAAGGAAGTGATAATCTCAAAGCTTTTATCTAGACTACAGATGAAGGCGAGATTATCACTTGAGCCAATTATCCGGTTGATTTCAGCTTTATCTAGAGATTTGCTGGAGGATTTTTTCCCGTTTTTACCAAGGATTGTTGATTCTTTAGTTTCTCTTCTCGAAAATGGTGCTGATAAGGAAACTGAGATTATTGAACAGATCTTCTGCTCATGGTCATCAATGATGATGTATTTGCAAAAGTATCTAAGACGAGACATTGTATATGTGCTCAAGATTACGACCAAATTAAGATATTATGTTAAAGAATATGTCCAAGACTTCATGGCAGAAGCAATGTCATTCTTGCTACGGAATGCACCTGTTGAAGAGCTTATAAAAGGTGTAAGAAAGCTCATGTTTGACGTTGTGAAGAAACAATCAGTTGAGAGAAAAGCTGGTGTTAGTGCACTATTGTATTATACTATGAGAGGAACATCACTGAAGTTCCATTCAAAGGCAGAGCGTGTACTGCAGATATTGCTGGATAATTCAATTTTCAGGATTGGTGATAAATTCACCGAAGGTGCAGACACTATTGTTGAGGTCATTGATGCTGCCTTCCAAAGGTTGTGTGAAGCACTGGAGTCCAAGGAGTTGACTTTGTTGTGGAATTGCTTGTATCAGGAGACCATTGATGCTATAAATAGCAAAAACTCTTCCTACCTTGGCAGACTCTTGACTTTATTAATCTCGAACGTCCAGTTTGACGAAGGACGCAAAGTTTTAGATTATGGGCCGCTTCTTGAACTTGTGACAATGCTTGTGCAAAAGCTTTTTGTCTCTCATGGTTCCACAGTGGCTGAGGATGGTCTTGTCGAGGTTCTTGATAAGGTTCTGAAGTTAATGCTATGTATTGTCGATGGGCTACATCGTGCTAATAACTCGTCTGCTCTCCAACACTGCTGTCTGCAATGGACTCCTCTATTTGAGTTGCAAAACTTGAGTTTGTTGGAATTTATTGGAGAAATGCTACTGAAGGATTCTTCCATAGTGTGTGCATTCCGTGCCATCATTTTGAGGACATTGGATAATTTAATTGAAAATTCCCTGGAACAAGTGATCTGTCTTTGTCTCTGCTTATCTGAGAAAATGCAAGTAGCGGTTGACATCCATGGGGTGTTATTTGGAGGACATTCAAGGATTCAGCAATTTGTGCAGCAAACTGTTACCAACTGGGTATCTCTGATAAAGGGTTTTAGAAATGGAGATCGCTTGTCTGCTCAACTTGATGAGGCTGAACTGGCTTTGCTGTGGGGAGTCATATGCTGCTATCCCTATGCCTTTGACACTCCCCACTGTCTGGCCTTGTTAATGGACCTGATTGATGAAATTGATCAACTTATACTGGCCCAAGATGATAAAATCCTAGGTTTTGCTAGGCACACCTGGCAAAGCCTGATTGGTACTGCTATAAGTTCCCACCACAGACTGTGTTGCAATACGAAAGCTGGGTTTGAAGATGCAAATAAGGTTGTGCAACTTGCGAAAAAACACAAAGCATCTCCTCAAGTGTTGGTGGCTGTTGCTGATTATCTCGATAGTGTGCATGGGTCTAAATTGCAAGAAGCTTATGACACATACCATCAGGAGTTCGAGGCAAACAAGTTTGTGGATGCAGTTGATTGTTTTGCAGAAAATTTATGTCACTTTGACAAGAGGATTCGTGTCTCAACTTTACGAATACTGTCGCATTATCAGCCTCTCAGTTGTGATATCTATGCTTCAGATCGACCTGTAGGGCAGAAAATGAGTGATGAAATTTGCCAGACTTCCCATGGCATTGGTCTGGGTGGTAATGTGCTTGAGCTCCTCCTTTCTATTGAGACGATTCCTCTTTCAGTTTCTACCAGCAGGAAAGTGATCCTACTGATCTCTAAAATACAGATGGATTTATCTGCAGGAAGGATTGGTGAAAGCTATTTACCCTTGCTTTTATATGGGATAATAGGCATCTTTTATAATAGATTTAGTTATCTGTGGGCTCCAGCATTGGAGTGCCTTGCTTTTTTAATTAGCAAACATGCTGGAACTATATGGGACATATTTATAAGGTATCTCAGAGACTGCCAATTGGTTTTCAAAGCTTCCTGTGATCATGTTAATGAAGTAACTGCTGATTTGCCTGACAAGTCAAATGGCTTGGTGAAGCGCTTTCATTTGTTTACAAGTCCAGTGGTGGATAGGACACCTATTGAGTCGGTATTTTCTCTGTTGATCCAATCTCTGCAAAAAGTTCCAACTATTGCTGAAGCTCGATCTCGGCAACTTGTTCCTCTTTTCTTGAACTTTTTGGGCTACAGTGATCATGAGCATTCAAGTGTTGGTTCATTCGACTCACATGCTTGTAAAGGAAAACAATGGAAGGGCATCCTCAAAGAATGGCTGAACCTGCTAAAATTGATGCGCAATCCTAAATCCTTCTACTGGAGTCAGTTTCTCAAAGAAGTTTTGCAAAACAGGCTTCTGGATGACAATGACCCTGAAATACAGATGAAGGTTCTGGAGTGCCTCCTGACATGGAAGGATGCGTTCTTACTGCCTTATGAGCAGAATCTCAGGAACTTGATTGATTCAAAAAGCTTACGGGAAGAATTAACTACCTGGAGTTTATCCTTGGATTCTAATCTGATTGAATATAGTCACAGAGCTTATATTGTTCCTTTAGTCATCCGGATTTTGGTCCCCAAAGTGAGAAACTTAAAGACACTAGCCTCACGAAAGCACAAGAGTGTGTATCATCGGAAGGCAGTTCTTGGTTTCATTGCTCAGTTAGATGTCAATGAGCTTCCGCTTTTCTTTGCACTGCTGGTAAAGCCATTTCAAGTTATTACAATGGGAAGTGATGGCATGCAGAATTGGTTTGTGTATTCTGGAAGCAGTTCAATGGACGACTTTCTGGCATTTAACTTTTTGAAGTATTTCACTACGGATAATATAGCAGCCCTATCTTGGAAGAAGAGATCTGGTTACTTGCATGTAATTGAGGATATTCTGATGACCTTTGATGAACATCATATTAACCCATTCCTTCAACTGTTAATGGGTTCTGTCATGCGATTTTTGGCTTTCTGTACGTGTCAATTGGACAGGGGAAAGAGCAACCAGGCTTCGAATGAGGACACTGGAGCAGGGGATAATCTTTTGGTGGGTGTGGAAAGTAAGCAGCTCAAGGATCTGAGGTCTCTATGCCTGAAAATTGTTTCCTCTGTTTTGATTAAGTATGAAGAACATGAGTTCGATGGCGAATTGTGGGACCTTTTCTTCCATTCGGTGAAACCATTAATTGAAGGCTTCAAACAAGAGGGTTCAAGCAGCGAGAAGCCAAGCTCACTGTTCTCTTGCTTTCTTTCTATGAGCAGAAGCCACAAACTTGTATCCCTGTTGTGTAGGGAACAAAGCCTGGTCCCAGATATGTTTTCAATGCTGTCTATTACAACTGCATCTGAAGCAATTTTATCAGGCGTTTTAAAGTTTATAGAGAACCTTCTCAATCTTGACAGTGACTTGGGGGAAGAGGACAGTTGTGTTAGAGAAGTTCTACTTCCTAACGTTGAGGAACTTACCTGTAGTCTGCATTCTCTTTTTCTCGGTGATTCTCCTATAAAGAGGAAATTGATCAAACATCCTGGGGAGTCTCTGATTAAAGTATTTAAGTTGCTACCCAAGTATGTGAGCAATCAATCACTGGGAAGAAAGATTATGGATGTTTTACTTATGTTCTTGTCGAAGGGAGCTCAGAACCCTGATGTTTATCGAGAAATTCTGCATGTGATTCGAGACTTGTTACCTGTCTTGAGTGGCACATGCGATAAGGAGATTCTGGTTGCAGTTTCCCCTCTGCTTAGTTGGGTCGAGTTGGATATGCGAGTATCTATATGTAATCTTCTGGCTGCTCTTGCTGAAACTGACCATTCTATAGCTGTTGTGGGAAAACTTATAAATGAATTGAATGCAACCTCTTCCATGGAAATAGAAGGCCTTGACTATGACAGAATAACGAATGCATATGAAAAGATTAGCTTTGATCTGTTCTATTCTGTTGAAGTGGATCACGCATTAATCATTTTGTCTCAGTTTGTCTATGATATGTCCTCTGATGAATTAATCTTAAGGCACAGTGCATATCGGTCGTTGCATGCATTCATTGAATTTTCCACCAAGATCATTGACCGTGAAACAAAGGGGGTAGAAAAAACACCAGAAGGCATGGTGGTTCATGACAGTAGTTGCTGGACAAAATCCTCTGTTGAGCGCATTGTTGATAAGTTCCTCTTGAAGCATTTAGGAGGGGTGATGAGGAAGAAAGCATCAATTCGGAAGGAATGGATGGATCTCCTACGAGCAATGGTCTTGAATCTCCCTGAATTGGCAAACCTGAATTCGTTCAACCCATTATGCAGTGAAGATGCTGAAGTAGATTTCTTTTTCAATATTGTTCATCTGCAGAAGCATAGAAGGGCAAGGGCTTTGTCACGCTTTAGGAGTATCATAAGTACCAGTAGCATGTCCGAGGACATCCTTAACAAGATTTTTGTGCCAATGTTTTTCAATATGCTGTTTGATGTTGAAGATGGAAAGATAGAGCAAATAAAAAATGCGTGCCTAGAGGCCCTTGCATCAGTTGCTGGTCATGTGGAATGGAGGTCCTATTATGCATTGCTCATTAGATGCTTCCGACAAATGACAACAAATCCTGAGAAGCAGAAGCTATTGTTGCGTTTAATCTGCTTTATTTTGGACCAGTTTCATTTCTCAGAAGTCAACTTTAGTCGAGAATCTATAGGCCCTTCCGAAACTGCTCCAGATACAGTCAAGTTGGATACTGCCTCAGTTACTTTGAGAAAATGTTCTTCAATTGAGGCCATGGAGATACAGGATTCCCTCCAGAAAAATGTGCTACCAAGGATACAGAAGCTTCTGAACTGTGACTCGGATAAGCTTAATGTTAATATTAATCTAGCAGCCCTCAAGCTGCTAAAGTTGCTTCCAGGTGACACGCTGGATTCACAGCTTCCTACTATCATTCATCACATCGTAAATCTCTTAAAGAGTCGTGCAGAAAGTACCCGTGATGAAGGCAGGTCTGCTTTAGCAGCTTGTTTGAAGGAACTTGGGCTAGAATACTTGCAATTCATACTCAATGTCCTGCGTGCTACACTGAAGCGAGGATATGAGCTGCATGTACTGGGTTACACATTGAACTTCATATTGTCAAAGTTTCTTGTGCATCCCAGTAGGATGAAGTTGGATTATTGTTTGGAAGATCTTTTATCAATAGTAAAGAGCGATATCCTTGGAGATGTTTCCGAAGAAAAAGAGGTGGAGAAGATAGCATCTAAAATGAAGGAAACTAGGAAACGAAAGTCATTTGATACGTTGAAATTGATTGCACAAAACATCACATTCAAAAGCCATGCTTTGAAACTTCTTTCTCCTGTTACTTCTCAGTTACAGAAGCATCTGACTCCAAAGCTGAAAGTGAAGTTGGAGAGCATGTTAAGTCATATTGCAACTGGGATTGAATCTAATCCGTCTGTTGATCAGACTGACCTGCTTATTTTTGTATATGGCCTCATTGAAGATGGAATAAACAAAGAAATGGGTCAGGGTGATAATTTGACAGTTCCTTCTGGAGAGAAATATCATAAGGATAACATGAGCGGGAACAGAGTTGCTACGAGTCAGCTGTTTCAGATTGACTCTCAGGGTTCACATATGATTACGGTGTTTGGTCTTGGATTGTTGCATGCTCGTCTCAAGAATTCAAAAATGGACAGAAATGATGTAAATCTGCTGTCCATGTTGGATCCTTTTGTTGTACTGTTATGCAGCTGCTTAAGTTCCAAATATGAAGATATCTTGTCTGCATCTTTAAGATGTTTGACTCCTCTGTTCAGATTGCCCTTGCCATCTTTTGAAACTCAGGCTGACAAAATTAAAGGAGCGCTGCTTGATATTGCCCAAAGTTCTGTGGATAGTAGCAGCCCTCTGATGCAGTCATGCCTCAAATTATTAACTGTGCTTCTCCGGATGACCAACATAACACTTTCTTCTGAAGAATTACAAACATTGATACAATTTCCCATATTTGTTGACCTCGAAAGGAATTCTTCTTTCCTTGCCCTTTCTCTACTGAAGGCAATCATCAGCCGCAAGTTAGTGGTACCTGAGATATATGATGTTGTAAAACAAGTTGGAGAATTGATGGTAACTAGTCAAGTGGATTCTATACGTAAGAAGTGCAGTCAGATTTTATTGCAATTTTTACTCGATTACCATCTATCTGAGAAGCGGTTGCAGCAGCATTTGGATTTTCTGCTTTCGAATCTGAGGTATGAGCATTCAAGTGGAAGAGAAGCTGTGCTTGAAATGCTTCATGCCATTATTGTCAAGTTTCCTAAAAGCGTTCTGGATGAGCAGTCCCAATCACTATTCATCCATTTGGTGGTTTCTTTAGCAAATGATCAAGATAACAGAGTTCGCTCTATGACTGGTGCAGTGATAAAACTTTTAGTTGGGCGTATAAGCCCTCATCCACTTCATTCTATCCTTGAGTATAGTCTTTCTTGGTATTTGGGTGGGAAAAAGCAACTCTGGAGTGCTGCAGCACAGGTCTTAGGGCTGCTGGTTGAAGTCATGAAGAAAGGCTTTCATAAATATATTTCTAGTATATTGCCTGTAGCTAGAAGCGTTTTGCAGTCTGCTGTCAGTTCAGTTGCAAGTGACCAACTGGATCTCCCTGATGAGGCAGCTATTCCTTTCTGGAAAGAAGCGTATTACTCTCTGGTTATGTTGGAGAAAATTTTACATCAATTTCAGCATTTAACTTTTGAAGCAGAATTTGAGGATATATGGACAGCAGTGTCAGAGTTGCTGCTGCATCCACATATGTGGCTACGCAATATATCCAGTCGTCTTTTAGCATTTTACTTCGCAGCAATAACTGATGCATGCAGAGGAAACAATGAGAAGCAATTAGGAGACTTTCTTCTGATGAGAAAAAGCAGACTTTTTCTGATAGCTGTTTCCTTGTGCTGCCAAATGAAGACGCAACCTGCGGATGATGCAGCAGGACACCTCATGATAGAAAATATTGTTTTCTCCATGAGTTGTTTAAATTCTTTGATGGGACATGTTGAGCCTCTAGCTTGGAAAAGTTTTTGGCTTACTCTTGGACAGGATGAGAAGCTTTGCTTTCTCAAAGCGTTCCAATTGCTTGACCCAAGAAATGGAAAAGCCATCTTTGTCTCTCTAACATCTGGTCTAGAAGGCCATAATGATGGCCACTCTGGAGATGGTCGATATTTGCTCGTACGCAGTTTGCTTAAAAGGTTGCAGAAGATTGCCCTTCAGATGGAGCATGTTCAGTTAGAAATTGTCTTCGGTATATTCCAGAAGTTCTCATCACAAATTGGTGGTGAAGATGCAGTGCATTATGCATATCAGTTGCTACTACCGCTCTATAAAGTTTGTGAAGAATTGACGGGGAAAGTCATATCTGAAAATTCGAAACAGTTAGCTCAAGAGGTTTCTGAGTCATTACGAAGCACTTTGGGCCTCCAGAATTTCGTACAAGTTTATGGCCAGATAAGGAAGGATCTTAAGCACAAGAGGGACAAAAGGAAACAGGATGAGAAGCTCATGGCTGTGATCAATCCAGTGCGTAATGCCAAAAGGAAACTGAGGATGTCCGCCAGGCATAGCGCCCACAAGAAAAGGAAAATAATGACCATGAAGATGGCGAGATGGATGCATTAG
Protein:  
MATPSDAQAVKSLNTAPGRRRFVFKTFSQRLEEIEIDVYKSLDRIKSEPSEGSSFFRDCLVEWRELNTTEDFISYYEEIMPLVQTLPLVLLHKEVIISKLLSRLQMKARLSLEPIIRLISALSRDLLEDFFPFLPRIVDSLVSLLENGADKETEIIEQIFCSWSSMMMYLQKYLRRDIVYVLKITTKLRYYVKEYVQDFMAEAMSFLLRNAPVEELIKGVRKLMFDVVKKQSVERKAGVSALLYYTMRGTSLKFHSKAERVLQILLDNSIFRIGDKFTEGADTIVEVIDAAFQRLCEALESKELTLLWNCLYQETIDAINSKNSSYLGRLLTLLISNVQFDEGRKVLDYGPLLELVTMLVQKLFVSHGSTVAEDGLVEVLDKVLKLMLCIVDGLHRANNSSALQHCCLQWTPLFELQNLSLLEFIGEMLLKDSSIVCAFRAIILRTLDNLIENSLEQVICLCLCLSEKMQVAVDIHGVLFGGHSRIQQFVQQTVTNWVSLIKGFRNGDRLSAQLDEAELALLWGVICCYPYAFDTPHCLALLMDLIDEIDQLILAQDDKILGFARHTWQSLIGTAISSHHRLCCNTKAGFEDANKVVQLAKKHKASPQVLVAVADYLDSVHGSKLQEAYDTYHQEFEANKFVDAVDCFAENLCHFDKRIRVSTLRILSHYQPLSCDIYASDRPVGQKMSDEICQTSHGIGLGGNVLELLLSIETIPLSVSTSRKVILLISKIQMDLSAGRIGESYLPLLLYGIIGIFYNRFSYLWAPALECLAFLISKHAGTIWDIFIRYLRDCQLVFKASCDHVNEVTADLPDKSNGLVKRFHLFTSPVVDRTPIESVFSLLIQSLQKVPTIAEARSRQLVPLFLNFLGYSDHEHSSVGSFDSHACKGKQWKGILKEWLNLLKLMRNPKSFYWSQFLKEVLQNRLLDDNDPEIQMKVLECLLTWKDAFLLPYEQNLRNLIDSKSLREELTTWSLSLDSNLIEYSHRAYIVPLVIRILVPKVRNLKTLASRKHKSVYHRKAVLGFIAQLDVNELPLFFALLVKPFQVITMGSDGMQNWFVYSGSSSMDDFLAFNFLKYFTTDNIAALSWKKRSGYLHVIEDILMTFDEHHINPFLQLLMGSVMRFLAFCTCQLDRGKSNQASNEDTGAGDNLLVGVESKQLKDLRSLCLKIVSSVLIKYEEHEFDGELWDLFFHSVKPLIEGFKQEGSSSEKPSSLFSCFLSMSRSHKLVSLLCREQSLVPDMFSMLSITTASEAILSGVLKFIENLLNLDSDLGEEDSCVREVLLPNVEELTCSLHSLFLGDSPIKRKLIKHPGESLIKVFKLLPKYVSNQSLGRKIMDVLLMFLSKGAQNPDVYREILHVIRDLLPVLSGTCDKEILVAVSPLLSWVELDMRVSICNLLAALAETDHSIAVVGKLINELNATSSMEIEGLDYDRITNAYEKISFDLFYSVEVDHALIILSQFVYDMSSDELILRHSAYRSLHAFIEFSTKIIDRETKGVEKTPEGMVVHDSSCWTKSSVERIVDKFLLKHLGGVMRKKASIRKEWMDLLRAMVLNLPELANLNSFNPLCSEDAEVDFFFNIVHLQKHRRARALSRFRSIISTSSMSEDILNKIFVPMFFNMLFDVEDGKIEQIKNACLEALASVAGHVEWRSYYALLIRCFRQMTTNPEKQKLLLRLICFILDQFHFSEVNFSRESIGPSETAPDTVKLDTASVTLRKCSSIEAMEIQDSLQKNVLPRIQKLLNCDSDKLNVNINLAALKLLKLLPGDTLDSQLPTIIHHIVNLLKSRAESTRDEGRSALAACLKELGLEYLQFILNVLRATLKRGYELHVLGYTLNFILSKFLVHPSRMKLDYCLEDLLSIVKSDILGDVSEEKEVEKIASKMKETRKRKSFDTLKLIAQNITFKSHALKLLSPVTSQLQKHLTPKLKVKLESMLSHIATGIESNPSVDQTDLLIFVYGLIEDGINKEMGQGDNLTVPSGEKYHKDNMSGNRVATSQLFQIDSQGSHMITVFGLGLLHARLKNSKMDRNDVNLLSMLDPFVVLLCSCLSSKYEDILSASLRCLTPLFRLPLPSFETQADKIKGALLDIAQSSVDSSSPLMQSCLKLLTVLLRMTNITLSSEELQTLIQFPIFVDLERNSSFLALSLLKAIISRKLVVPEIYDVVKQVGELMVTSQVDSIRKKCSQILLQFLLDYHLSEKRLQQHLDFLLSNLRYEHSSGREAVLEMLHAIIVKFPKSVLDEQSQSLFIHLVVSLANDQDNRVRSMTGAVIKLLVGRISPHPLHSILEYSLSWYLGGKKQLWSAAAQVLGLLVEVMKKGFHKYISSILPVARSVLQSAVSSVASDQLDLPDEAAIPFWKEAYYSLVMLEKILHQFQHLTFEAEFEDIWTAVSELLLHPHMWLRNISSRLLAFYFAAITDACRGNNEKQLGDFLLMRKSRLFLIAVSLCCQMKTQPADDAAGHLMIENIVFSMSCLNSLMGHVEPLAWKSFWLTLGQDEKLCFLKAFQLLDPRNGKAIFVSLTSGLEGHNDGHSGDGRYLLVRSLLKRLQKIALQMEHVQLEIVFGIFQKFSSQIGGEDAVHYAYQLLLPLYKVCEELTGKVISENSKQLAQEVSESLRSTLGLQNFVQVYGQIRKDLKHKRDKRKQDEKLMAVINPVRNAKRKLRMSARHSAHKKRKIMTMKMARWMH